publicações selecionadas
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artigo académico
- TranSyT, an innovative framework for identifying transport systems. Bioinformatics. 2023
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artigo de revista
- Methods for automated genome-scale metabolic model reconstruction. Biochemical SocIETy Transactions. 2018
- Computing and applying atomic regulons to understand gene expression and regulation. Antibiotics. 2016
- Reconstruction of the regulatory network for Bacillus subtilis and reconciliation with gene expression data. Antibiotics. 2016
- Enabling comparative modeling of closely related genomes: Example genus Brucella. 3 Biotech. 2015
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capítulo de livro
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documento
- TranSyT, the Transport Systems Tracker 2021
- Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 2020
- MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 2020
- Automated reconstruction and comparison of metabolic models for diverse fungal genomes 2018
- Improving automated model reconstruction across phylogenetically diverse genome-scale metabolic models 2018
- Automated pathway curation and improving metabolic model reconstruction based on phylogenetic analysis of pathway conservation 2017
- Reconstruction of regulatory network models and reconciliation with gene expression data 2015
- Reconciling gene expression data with regulatory network models 2015
- Reconciling gene expression data with regulatory network models – a stimulon-based approach for integrated metabolic and regulatory modeling of Bacillus subtilis 2014
- TranSyT, the Transport Systems Tracker