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Fdez-Riverola, F.

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publicações selecionadas

artigo académico
- Encouraging Eco-Innovative Urban Development. Algorithms. 2024
- Reconstruction of the network of experimentally validated AMP-drug combinations against Pseudomonas aeruginosa infections. Current Bioinformatics. 2016
- Behavior analysis environments e-learning. EDMETIC. 2015
- E-learning Platforms and E-learning Students: Building the Bridge to Success. ADCAIJ: Advances in Distributed Computing and Artificial Intelligence Journal. 2013
- An Approach to Assessing Stress in eLearning Students. Proceedings of the 11th European Conference on E-Learning. 2012
- E-learning Platforms and E-learning Students: Building the Bridge to Success. Adcaij-Advances in Distributed Computing and Artificial Intelligence Journal. 2012
artigo de conferência
- A Sustainable Approach to Marketable Banking Stress and Burnout 2022
- An Entropic Approach to Burnout in the Management of a Kitchen Staff Team 2022
- An entropic approach to technology enable learning and social computing 2022
- Hospitality and Hospital Management 2022
- A health-related study from food online reviews. The case of gluten-free foods. AI Communications. 2021
- The activity of bioinformatics developers and users in Stack Overflow. AI Communications. 2021
- Benchmarking biomedical text mining web servers at BioCreative V.5: the technical Interoperability and Performance of annotation Servers - TIPS track 2017
- Evaluation of chemical and gene/protein entity recognition systems at BioCreative V.5: the CEMP and GPRO patents tracks 2017
- A novel search engine supporting specific drug queries and literature management. AI Communications. 2015
- Analysis of student's context in e-Learning 2014
- Marky: a lightweight web tracking tool for document annotation. AI Communications. 2014
- An approach to assessing stress in e-learning students 2012
- Moodle and affective computing : knowing who´s on the other side 2011
- A framework for the development of biomedical text mining software tools. IEEE International Conference on Bioinformatics and Bioengineering. 2008
artigo de revista
- Targeted depletion of pks+ bacteria from a fecal microbiota using specific antibodies. mSystems. 2023
- Use social media knowledge for exploring the portuguese wine industry: following talks and perceptions?. Scientific Programming. 2022
- Boosting biomedical document classification through the use of domain entity recognizers and semantic ontologies for document representation: the case of gluten bibliome. Neurocomputing. 2022
- Computational approach to the systematic prediction of glycolytic abilities: looking into human microbiota. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2021
- A framework to extract biomedical knowledge from gluten-related tweets: the case of dietary concerns in digital era. Artificial Intelligence in Medicine. 2021
- HaemoKBS: a knowledge-based system for real-time, continuous categorisation of adverse reactions in blood recipients. Neurocomputing. 2021
- In silico and functional analyses of immunomodulatory peptides encrypted in the human gut metaproteome. Journal of Functional Foods. 2020
- Revisiting the metabolic capabilities of Bifidobacterium longum susbp. longum and Bifidobacterium longum subsp. infantis from a glycoside hydrolase perspective 2020
- Understanding the social evolution of the Java community in Stack Overflow: a 10-year study of developer interactions. Future Generation Computer Systems. 2020
- The extracellular proteins of Lactobacillus acidophilus DSM 20079T display anti-inflammatory effect in both in piglets, healthy human donors and Crohns Disease patients. Journal of Functional Foods. 2020
- Next generation community assessment of biomedical entity recognition web servers: metrics, performance, interoperability aspects of BeCalm. Journal of Cheminformatics. 2019
- Using Twitter to understand the human bowel disease community: exploratory analysis of key topics. Journal of Medical Internet Research. 2019
- Online visibility of software-related web sites: The case of biomedical text mining tools. Information Processing & Management. 2019
- In silico prediction reveals the existence of potential bioactive neuropeptides produced by the human gut microbiota. Food Research International. 2019
- Application of agent-based modelling to assess single-molecule transport across the cell envelope of E. coli. Computers in Biology and Medicine. 2019
- Computational prediction of the bioactivity potential of proteomes based on expert knowledge. Journal of Biomedical Informatics. 2019
- DEWE: a novel tool for executing differential expression RNA-Seq workflows in biomedical research. Computers in Biology and Medicine. 2019
- In silico approach for unveiling the glycoside hydrolase activities in Faecalibacterium prausnitzii through a systematic and integrative large-scale analysis. Antibiotics. 2019
- BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results. Antibiotics. 2018
- The evolving role of information technology in haemovigilance systems. Journal of Healthcare Engineering. 2018
- Agent-based model of diffusion of N-acyl homoserine lactones in a multicellular environment of Pseudomonas aeruginosa and Candida albicans. Antibiotics. 2018
- In Silico Screening of the Human Gut Metaproteome Identifies Th17-Promoting Peptides Encrypted in Proteins of Commensal Bacteria. Antibiotics. 2017
- Collaborative relation annotation and quality analysis in Markyt environment. Database. 2017
- MAHMI database: a comprehensive MetaHit-based resource for the study of the mechanism of action of the human microbiota. Database. 2017
- P4P: a peptidome-based strain-level genome comparison web tool. Nucleic Acids Research. 2017
- A peptidome-based phylogeny pipeline reveals differential peptides at the strain level within Bifidobacterium animalis subsp. lactis. Antibiotics. 2016
- Improving phylogeny reconstruction at the strain level using peptidome datasets. PLoS Computational Biology. 2016
- BIOMedical search engine framework: lightweight and customized implementation of domain-specific biomedical search engines. Computer Methods and Programs in Biomedicine. 2016
- From amino acid sequence to bioactivity: the biomedical potential of antitumor peptides. Protein Science. 2016
- Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. Database. 2016
- Reconstruction of the network of experimentally validated AMP-drug combinations against Pseudomonas aeruginosa infections. Current Bioinformatics. 2016
- The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge. Database. 2016
- Marky: a tool supporting annotation consistency in multi-user and iterative document annotation projects. Computer Methods and Programs in Biomedicine. 2015
- Agent-based spatiotemporal simulation of biomolecular systems within the open source MASON framework. Biomed Research International. 2015
- Enabling systematic, harmonised and large-scale biofilms data computation: The Biofilms Experiment Workbench. Computer Methods and Programs in Biomedicine. 2015
- Web scraping technologies in an API world. Briefings in Bioinformatics. 2014
- A new approach to bacterial colony morphotyping by matrix-assisted laser desorption ionization time of flight-based mass spectrometry. Talanta. 2013
- E-learning platforms and e-learning students : building the bridge to success. ADCAIJ: Advances in Distributed Computing and Artificial Intelligence Journal. 2012
- AIBench: A rapid application development framework for translational research in biomedicine. Computer Methods and Programs in Biomedicine. 2010
- BioDR: Semantic indexing networks for biomedical document retrieval. Expert Systems with Applications. 2010
- @Note: A workbench for Biomedical Text Mining. Journal of Biomedical Informatics. 2009
capítulo de livro
- An Entropic Approach to Technology Enable Learning and Social Computing 2022
- A Multi-valued Logic Assessment of Organizational Performance via Workforce Social Networking 2021
- Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. Computational Methods in Applied Sciences. 2009
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