publicações selecionadas
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artigo académico
- Assessing the Seasonal and Spatial Dynamics of Zooplankton through DNA Metabarcoding in a Temperate Estuary. Animals. 2023
- Current status and topical issues on the use of eDNA-based targeted detection of rare animal species. Heredity. 2023
- Hurdles and opportunities in implementing marine biosecurity systems in data-poor regions. Bioscience. 2023
- To Be, or Not to Be: That Is the Hamletic Question of Cryptic Evolution in the Eastern Atlantic and Mediterranean Raja miraletus Species Complex. Animals. 2023
- Status of the BOLD reference library of DNA barcodes of caddisflies (Insecta: Trichoptera) from the Western Balkans. Periodicum Biologorum. 2023
- Revealing the diversity of the green Eulalia (Annelida, Phyllodocidae) species complex along the European coast, with description of three new species. Organisms Diversity & Evolution. 2023
- Subsea Cables as Enablers of a Next Generation Global Ocean Sensing System. Oceanography. 2023
- The curious and intricate case of the European Hediste diversicolor (Annelida, Nereididae) species complex, with description of two new species. Systematics and Biodiversity. 2022
- Reappraisal of the hyperdiverse Platynereis dumerilii (Annelida: Nereididae) species complex in the Northern Atlantic, with the description of two new species. Invertebrate Systematics. 2022
- Surveillance of non-indigenous invertebrate species through DNA metabarcoding in recreational marinas in the North and Center of Portugal. ARPHA Conference Abstracts. 2021
- The small polychaete Platynereis dumerilii revealed as a large species complex with fourteen MOTUs in European marine habitats. ARPHA Conference Abstracts. 2021
- Venturing into auditing of reference libraries: from the hackathon on marine invertebrates to sorting with BAGS. ARPHA Conference Abstracts. 2021
- Molecular diversity within the genus Laeonereis (Annelida, Nereididae) along the west Atlantic coast. Peer J. 2021
- Current status of the DNA barcode reference library of non-indigenous marine species occurring in European coastal regions. Frontiers in Marine Science. 2019
- Cryptic or cosmopolitan? Unveiling the Laeonereis culveri complex along South American estuaries through DNA barcoding. Frontiers in Marine Science. 2019
- Evolutionary insights derived from comprehensive analyses of DNA barcoding diversity in marine members of the superorder Peracarida (Crustacea: Malacostraca). Frontiers in Marine Science. 2019
- Compiling a DNA barcode reference library for benthic molluscs of the Southern European Atlantic coast.. Frontiers in Marine Science. 2016
- Comparison between morphological and DNA barcode-suggested species boundaries among shallow-water amphipod fauna from the southern European Atlantic coast. Genome. 2015
- Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf. EJT. 2014
- A reliable DNA barcode reference library for the identification of the North European shelf fish fauna. Molecular Ecology Resources. 2014
- New records of marine wood borers (Bivalvia: Teredinidae and Isopoda: Limnoriidae) from São Miguel, Azores, with a discussion of some aspects of their biogeography. Açoreana. 2014
- Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea. Marine Ecology. 2013
- First record of Zenion hololepis (Zenionidae) in Portuguese continental waters: the northernmost occurrence in the eastern Atlantic. Marine Biodiversity Records. 2012
- A ranking system for reference libraries of DNA barcodes: application to marine fish species from Portugal.. Antibiotics. 2012
- Investigating the taxonomy and systematics of marine wood borers (Bivalvia:Teredinidae) combining evidence from morphology, DNA barcodes and nuclear locus sequences. Invertebrate Systematics. 2012
- New insights into molecular evolution: Prospects from the barcode of life initiative (BOLI). Theory in Biosciences. 2010
- Assessment of dna damage in blood cells of spams aurata l. exposed to benzo[A]pyrene using three distinct genotoxicity assays. Fresenius Environmental Bulletin. 2009
- Probing marine Gammarus (Amphipoda) taxonomy with DNA barcodes. Systematics and Biodiversity. 2009
- DNA barcodes of fish of the Scotia Sea, Antarctica indicate priority groups for taxonomic and systematics focus. Antarctic Science. 2008
- DNA barcoding of shared fish species from the North Atlantic and Australasia: Minimal divergence for most taxa, but zeus faber and lepidopus caudatus each probably constitute two species. Aquatic Biology. 2008
- The Barcode of Life Initiative: Reply to Dupré, Hollingsworth and Holm. Genomics, Society and Policy. 2007
- The Barcode of Life Initiative: synopsis and prospective societal impacts of DNA barcoding of Fish. Genomics, Society and Policy. 2007
- Biological identifications through DNA barcodes: The case of the Crustacea. Canadian Journal of Fisheries and Aquatic Sciences. 2007
- Endosulfan-induced genotoxicity detected in the gilthead seabream, Sparus aurata L., by means of flow cytometry and micronuclei assays. Bulletin of Environmental Contamination and Toxicology. 2006
- Perchlorate in fish from a contaminated site in east-central Texas. Environmental Pollution. 2006
- Multi-level assessment of chronic toxicity of estuarine sediments with the amphipod Gammarus locusta: I. Biochemical endpoints. Marine Environmental Research. 2005
- Multi-level assessment of chronic toxicity of estuarine sediments with the amphipod Gammarus locusta: II. Organism and population-level endpoints. Marine Environmental Research. 2005
- Application of RAPD DNA fingerprinting in taxonomic identification of amphipods: A case-study with Gammarus species (Crustacea: Amphipoda). Journal of the Marine Biological Association of the United Kingdom. 2004
- RAPD analysis of southern populations of Gammarus locusta: Comparison with allozyme data and ecological inferences. Marine Ecology Progress Series. 2004
- Detection of DNA strand breakage in a marine amphipod by agarose gel electrophoresis: Exposure to X-rays and copper. Biomarkers. 2002
- Effects of temperature and salinity on life history of the marine amphipod Gammarus locusta. Implications for ecotoxicological testing. Ecotoxicology. 2002
- Low genetic variability of the widespread amphipod Gammarus locusta, as evidenced by allozyme electrophoresis of southern European populations. Crustaceana. 2002
- Sub-lethal effects of copper-spiked sediments on the amphipod Gammarus locusta. Evidence of hormesis? . Ecotoxicology and Environmental Restoration. 2001
- Review of the ecology of Gammarus locusta (L.). Polskie Archiwum Hydrobiologii. 2000
- Life history of the amphipod Gammarus locusta in the Sado estuary (Portugal). Acta Oecologica: International Journal of Ecology. 1999
- Acute marine sediment toxicity: A potential new test with the amphipod Gammarus locusta. Ecotoxicology and Environmental Safety. 1998
- Sensitivity of a marine amphipod to non-contaminant variables and to copper in the sediment. Écologie. 1996
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artigo de conferência
- Submarine Cables as Precursors of Persistent Systems for Large Scale Oceans Monitoring and Autonomous Underwater Vehicles Operation 2022
- Combining artificial substrates, morphology and DNA metabarcoding for investigating macrozoobenthic communities in NW Iberia 2019
- Cryptic or cosmopolitan? Unveiling the Laeonereis culveri complex along South American estuaries through DNA barcoding 2019
- Current status of the DNA barcode reference library of non-indigenous marine species occurring in European coastal regions 2019
- Evolutionary insights derived from comprehensive analyses of DNA barcoding diversity in marine members of the superorder Peracarida (Crustacea: Malacostraca) 2019
- Patterns of spatial and temporal variation in estuarine meiofaunal communities assessed through DNA metabarcoding: a case study in the Lima estuary (NW Portugal). 2019
- Biomonitoring coastal macrozoobenthic colonization of artificial substrates in NW Iberia using DNA metabarcoding 2019
- Hidden diversity and deep divergence in a presumed broadly distributed polychaete along the Atlantic coast of Americas 2019
- New avenues for data curation: hackathon on marine invertebrates 2019
- Prominent evolutionary divide between Macaronesian islands and nearby continental coasts in multiple peracarids (Crustacea): over 60 suspected new species 2019
- Small-scale spatial variation of meiofaunal communities in Rio Lima estuary (NW Portugal) assessed through metabarcoding 2019
- Status and highlights of the global DNA barcode reference library for marine peracarids (Crustacea: Peracarida). 2019
- A DNA barcode reference library for the superorder Peracarida (Crustacea) from European coasts 2017
- Compiling a global DNA barcode reference library for marine amphipods (Crustacea: Amphipoda) 2017
- A DNA barcode reference library for the superorder Peracarida (Crustacea) from the Southern European Atlantic coast 2016
- Deeply divergent DNA barcode lineages within Dynamene edwardsi (Isopoda) from the Northeast Atlantic suggest between four to eight cryptic species 2016
- Phylogeographic structure of Dynamene edwardsi (Crustacea: Isopoda) matches remarkably the sequential genesis of the Macaronesian islands. Genome. 2015
- A DNA barcode library for crustose brown algal species. 2011
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artigo de revista
- Artificial Seaweed Substrates Complement ARMS in DNA Metabarcoding-Based Monitoring of Temperate Coastal Macrozoobenthos. Diversity. 2023
- Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding. Estuarine, Coastal and Shelf Science. 2023
- Compilation, Revision, and Annotation of DNA Barcodes of Marine Invertebrate Non-Indigenous Species (NIS) Occurring in European Coastal Regions. Diversity. 2023
- Molecular evidence for extensive discontinuity between peracarid (Crustacea) fauna of Macaronesian islands and nearby continental coasts: over fifty candidate endemic species. Marine Biology. 2022
- Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods. Heredity. 2022
- From 13 to 22 in a second stroke: revisiting the European Eumida sanguinea (Phyllodocidae: Annelida) species complex. Zoological Journal of the Linnean SocIETy. 2022
- Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates. Metabarcoding and Metagenomics. 2021
- Revision and annotation of DNA barcode records for marine invertebrates: report of the 8th iBOL conference hackathon. Metabarcoding and Metagenomics. 2021
- DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review. Frontiers in Marine Science. 2021
- The network structure of intertidal meiofaunal communities from environmental DNA metabarcoding surveys in Northwest Iberia. Aquatic Sciences. 2021
- The Future of DNA Barcoding: Reflections from Early Career Researchers. Diversity. 2021
- Gaps in DNA sequence libraries for Macaronesian marine macroinvertebrates imply decades till completion and robust monitoring. Diversity and Distributions. 2021
- Molecular diversity within the genus Laeonereis (Annelida, Nereididae) along the west Atlantic coast: paving the way for integrative taxonomy. Antibiotics. 2021
- BAGS: An automated Barcode, Audit & Grade System for DNA barcode reference libraries. Molecular Ecology Resources. 2021
- Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life. Metabarcoding and Metagenomics. 2021
- Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates. Water. 2021
- Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding. Heredity. 2021
- Assessment of species gaps in DNA barcode libraries of non-indigenous species (NIS) occurring in European coastal regions. Metabarcoding and Metagenomics. 2020
- Taxonomic investigation of Ralfsia-like (Ralfsiales, Phaeophyceae) taxa in the North Atlantic Ocean based on molecular and morphological data, with descriptions of Pseudoralfsiaceae fam. nov., Pseudoralfsia azorica gen. et sp. nov. and Nuchella vesicularis gen. et sp. nov.. European Journal of Phycology. 2020
- Meiofauna metabarcoding in Lima estuary (Portugal) suggests high taxon replacement within a background of network stability. Regional Studies in Marine Science. 2020
- Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding. Estuarine, Coastal and Shelf Science. 2020
- Gap-analysis and annotated reference library for supporting macroinvertebrate metabarcoding in Atlantic Iberia. Regional Studies in Marine Science. 2020
- Advances in the use of molecular tools in ecological and biodiversity assessment of aquatic ecosystems. Limnetica. 2020
- How oogenesis analysis combined with DNA barcode can help to elucidate taxonomic ambiguities: a polychaete study-based approach. Biota Neotropica. 2020
- Molecular and morphometric analyses identify new lineages within a large Eumida (Annelida) species complex. Zoologica Scripta. 2019
- DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work. Heredity. 2019
- Macaronesian islands as promoters of diversification in amphipods: The remarkable case of the family Hyalidae (Crustacea, Amphipoda). Zoologica Scripta. 2019
- From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa. Apidologie. 2019
- Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates. Molecular Ecology. 2019
- Persistence of phylogeographic footprints helps to understand cryptic diversity detected in two marine amphipods widespread in the Mediterranean basin. Molecular Phylogenetics and Evolution. 2019
- Natural history and molecular evolution of demersal Mediterranean sharks and skates inferred by comparative phylogeographic and demographic analyses. Antibiotics. 2018
- Contrasting morphological and DNA barcode-suggested species boundaries among shallow-water amphipod fauna from the southern European Atlantic coast. Genome. 2017
- DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities. Acta Cytologica. 2017
- Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities. Genome. 2017
- Taxonomy, distribution and ecology of the order Phyllodocida (Annelida, Polychaeta) in deep-sea habitats around the Iberian margin. Deep-Sea Research Part II: Topical Studies in Oceanography. 2017
- DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe. Research Ideas and Outcomes. 2016
- Assembling and auditing a comprehensive DNA barcode reference library for European marine fishes. Journal of Fish Biology. 2016
- Distribution and species identification in the crustacean isopod genus Dynamene Leach, 1814 along the North East Atlantic-Black Sea axis. Zookeys. 2016
- Starting a DNA barcode reference library for shallow water polychaetes from the southern European Atlantic coast. Molecular Ecology Resources. 2016
- With a little help from DNA barcoding: Investigating the diversity of Gastropoda from the Portuguese coast. Acta Cytologica. 2016
- DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes. Antibiotics. 2014
- Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans. BMC Ecology. 2013
- Multigene molecular systematics confirm species status of morphologically convergent Pagurus hermit crabs. Antibiotics. 2011
- Systematic and evolutionary insights derived from mtDNA COI Barcode diversity in the Decapoda (crustacea: Malacostraca). Antibiotics. 2011
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capítulo de livro
- Why We Need Sustainable Networks Bridging Countries, Disciplines, Cultures and Generations for Aquatic Biomonitoring 2.0: A Perspective Derived From the DNAqua-Net COST Action. Advances in Ecological Research. 2018
- Ancient DNA in archaeological garum remains from the south of Portugal 2015
- The Contribution of the Barcode of Life Initiative to the Discovery and Monitoring of Biodiversity 2012
- Genomics in the Discovery and Monitoring of Marine Biodiversity 2010
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documento
- Fish Monitoring and Biodiversity Assessment in the Atlantic: Building DNA-Barcode Reference Libraries for Cabo Verde and Guinea-Bissau 2023
- Compilation, revision, and annotation of DNA barcodes of marine invertebrate non-indigenous species (NIS) occurring in European coastal regions 2023
- BAGS: An automated Barcode, Audit & Grade System for DNA barcode reference libraries of animal COI sequences 2020
- Estado das bibliotecas de referência de DNA barcodes de invertebrados marinhos da Macaronésia 2020
- Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding 2020
- Cryptic or cosmopolitan? Unveiling the Laeonereis culveri complex along South American estuaries through DNA barcoding 2019
- Combining artificial substrates, morphology and DNA metabarcoding for investigating marine amphipod communities in NW Iberia 2019
- A barcode gap-analysis for aquatic biomonitoring in Europe 2019
- Biomonitoring coastal macrozoobenthic colonization of artificial substrates in NW Iberia using DNA metabarcoding 2019
- Hidden diversity and deep divergence in a presumed broadly distributed polychaete along the Atlantic coast of Americas 2019
- Status and highlights of the global DNA barcode reference library for marine peracarids (Crustacea: Peracarida) 2019
- DNA barcode reference library for the superorder Peracarida (Crustacea) from European coasts 2017
- Cryptic diversity among two different peracaridean morphospecies in the Macaronesia region: implication for MPA management 2016
- Compiling a DNA barcode reference library for macrobenthic invertebrate fauna from the southern European Atlantic coast 2016
- Distribution and genetic diversity of the isopod genus Dynamene in rockyshore environments in the NE Atlantic Ocean 2015
- Book of Abstracts. 16th International Colloquium on Amphipoda, Universidade de Aveiro-Universidade do Minho 2015