publicações selecionadas
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artigo académico
- Guidelines and recommendations on yeast cell death nomenclature. Microbial Cell. 2018
- OptFlux: An open-source software platform for in silico metabolic engineering. BMC Systems Biology. 2010
- Natural computation meta-heuristics for the in silico optimization of microbial strains. BMC Bioinformatics. 2008
- Fermentation performance and intracellular metabolite patterns in laboratory and industrial xylose-fermenting Saccharomyces cerevisiae. Applied Microbiology and Biotechnology. 2002
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artigo de conferência
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documento
- FROG analysis ensures the reproducibility of genome scale metabolic models 2024
- Machine learning models for predicting permanent deformation in railway tracks. Transportation Geotechnics. 2024
- Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 2020
- MEMOTE for standardized genome-scale metabolic model testing. Nature Biotechnology. 2020
- Turnover dependent phenotypic simulation: a quantitative constraint-based simulation method that accommodates all main strain design strategies. ACS Synthetic Biology. 2019
- Metabolite secretion in microorganisms: the theory of metabolic overflow put to the test. Metabolomics. 2018
- Improving the flux distributions simulated with genome-scale metabolic models of Saccharomyces cerevisiae. Metabolic Engineering Communications. 2016
- TDPS - Turnover dependent phenotypic simulation: a quantitative constraint-based simulation method that accommodates all main strain design strategies 2015
- Production of β‑ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae. Microbial Cell Factories. 2015
- Improving the internal flux distributions from genome scale metabolic models of S. cerevisiae 2014
- OptFlux: a software for metabolic engineering 2009
- Design and application of genome-scale reconstructed metabolic models 2008
- An improved evolutionary algorithm-based framework for identifying in silico metabolic engineering targets 2006
- Evolutionary programming as a platform for in silico metabolic engineering. BMC Bioinformatics. 2005