publicações selecionadas
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artigo de conferência
- Predicting the number of biochemical transformations needed to synthesize a compound. IEEE International Joint Conference on Neural Networks (IJCNN). 2022
- A machine learning and chemometrics assisted interpretation of spectroscopic data - A NMR-based metabolomics platform for the assessment of Brazilian propolis. Computational Methods in Applied Sciences. 2012
- Combining syntactic and ontological knowledge to extract biologically relevant relations from scientific papers 2009
- A framework for the development of biomedical text mining software tools. IEEE International Conference on Bioinformatics and Bioengineering. 2008
- A tool for the automatic and manual annotation of biomedical documents 2008
- The @Note biomedical text mining workbench 2008
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artigo de revista
- Genetic variants as ovarian cancer first-line treatment hallmarks: a systematic review and meta-analysis. Cancer Treatment Reviews. 2017
- Metabolic Profiling and Classification of Propolis Samples from Southern Brazil: An NMR-Based Platform Coupled with Machine Learning. Journal of Natural Products. 2016
- CBFA: Phenotype prediction integrating metabolic models with constraints derived from experimental data. BMC Systems Biology. 2014
- Semantic annotation of biological concepts interplaying microbial cellular responses. BMC Bioinformatics. 2011
- BioDR: Semantic indexing networks for biomedical document retrieval. Expert Systems with Applications. 2010
- @Note: A workbench for Biomedical Text Mining. Journal of Biomedical Informatics. 2009
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capítulo de livro
- Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing. Computational Methods in Applied Sciences. 2009
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documento
- Development of novel genome-scale reconstruction strategies for production of terpenoids in Saccharomyces cerevisiae 2018
- Reconstruction of a genome-scale metabolic model for Actinobacillus succinogenes 2015
- Uncovering the metabolic capacities of H. pylori 26695 using 13C labeling experiments 2015
- Flexible and user friendly tools for the incorporation of fluxomics data into metabolic models 2014
- A 1H-NMR-based metabolomic analysis of propolis from Santa Catarina state 2012
- 13C-based metabolic flux analysis 2012
- Investigating metabolic responses in recombinant E. coli cultures using metabolomics and fluxomics data 2012
- Digging out evidences on escherichia coli stringent response from scientific literature 2009
- Uncovering mechanisms underlying the Escherichia coli stringent response: application of text mining approaches to identify meaningful relations in text documents 2009
- Bringing text miners and biologists closer together 2009
- The @Note biomedical text mining workbench 2008