publicações selecionadas
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artigo académico
- Advancements in DNA Metabarcoding Protocols for Monitoring Zooplankton in Marine and Brackish Environments. Journal of Marine Science and Engineering. 2024
- Benchmarking the discrimination power of commonly used markers and amplicons in marine fish (e)DNA (meta)barcoding. Metabarcoding and Metagenomics. 2024
- Comprehensive DNA metabarcoding-based detection of non-indigenous invertebrates in recreational marinas through a multi-substrate approach. Marine Environmental Research. 2024
- Multi-marker DNA metabarcoding for precise species identification in ichthyoplankton samples. Acta Cytologica. 2024
- Assessing the Seasonal and Spatial Dynamics of Zooplankton through DNA Metabarcoding in a Temperate Estuary. Animals. 2023
- Current status and topical issues on the use of eDNA-based targeted detection of rare animal species. Heredity. 2023
- Hurdles and opportunities in implementing marine biosecurity systems in data-poor regions. Bioscience. 2023
- To Be, or Not to Be: That Is the Hamletic Question of Cryptic Evolution in the Eastern Atlantic and Mediterranean Raja miraletus Species Complex. Animals. 2023
- Artificial Seaweed Substrates Complement ARMS in DNA Metabarcoding-Based Monitoring of Temperate Coastal Macrozoobenthos. Diversity. 2023
- Status of the BOLD reference library of DNA barcodes of caddisflies (Insecta: Trichoptera) from the Western Balkans. Periodicum Biologorum. 2023
- Macrozoobenthos monitoring in Portuguese transitional waters in the scope of the water framework directive using morphology and DNA metabarcoding. Estuarine, Coastal and Shelf Science. 2023
- Revealing the diversity of the green Eulalia (Annelida, Phyllodocidae) species complex along the European coast, with description of three new species. Organisms Diversity & Evolution. 2023
- Compilation, Revision, and Annotation of DNA Barcodes of Marine Invertebrate Non-Indigenous Species (NIS) Occurring in European Coastal Regions. Diversity. 2023
- The curious and intricate case of the European Hediste diversicolor (Annelida, Nereididae) species complex, with description of two new species. Systematics and Biodiversity. 2022
- Assessing the seasonal dynamics of zooplankton in a recreational marina of the northwest of Portugal through multi-marker DNA metabarcoding. ARPHA Conference Abstracts. 2022
- Molecular evidence for extensive discontinuity between peracarid (Crustacea) fauna of Macaronesian islands and nearby continental coasts: over fifty candidate endemic species. Marine Biology. 2022
- Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods. Heredity. 2022
- From 13 to 22 in a second stroke: revisiting the European Eumida sanguinea (Phyllodocidae: Annelida) species complex. Zoological Journal of the Linnean SocIETy. 2022
- Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates. Metabarcoding and Metagenomics. 2021
- Revision and annotation of DNA barcode records for marine invertebrates: report of the 8th iBOL conference hackathon. Metabarcoding and Metagenomics. 2021
- DNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna: A Review. Frontiers in Marine Science. 2021
- The network structure of intertidal meiofaunal communities from environmental DNA metabarcoding surveys in Northwest Iberia. Aquatic Sciences. 2021
- The Future of DNA Barcoding: Reflections from Early Career Researchers. Diversity. 2021
- Gaps in DNA sequence libraries for Macaronesian marine macroinvertebrates imply decades till completion and robust monitoring. Diversity and Distributions. 2021
- Molecular diversity within the genus Laeonereis (Annelida, Nereididae) along the west Atlantic coast: paving the way for integrative taxonomy. African Journal of Biotechnology. 2021
- Surveillance of non-indigenous invertebrate species through DNA metabarcoding in recreational marinas in the North and Center of Portugal. ARPHA Conference Abstracts. 2021
- Surveillance of non-indigenous invertebrate species through DNA metabarcoding in recreational marinas in the North and Center of Portugal. ARPHA Conference Abstracts. 2021
- The small polychaete Platynereis dumerilii revealed as a large species complex with fourteen MOTUs in European marine habitats. ARPHA Conference Abstracts. 2021
- BAGS: An automated Barcode, Audit & Grade System for DNA barcode reference libraries. Molecular Ecology Resources. 2021
- Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life. Metabarcoding and Metagenomics. 2021
- Integration of DNA-Based Approaches in Aquatic Ecological Assessment Using Benthic Macroinvertebrates. Water. 2021
- Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding. Heredity. 2021
- Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding. Heredity. 2021
- Assessment of species gaps in DNA barcode libraries of non-indigenous species (NIS) occurring in European coastal regions. Metabarcoding and Metagenomics. 2020
- Taxonomic investigation of Ralfsia-like (Ralfsiales, Phaeophyceae) taxa in the North Atlantic Ocean based on molecular and morphological data, with descriptions of Pseudoralfsiaceae fam. nov., Pseudoralfsia azorica gen. et sp. nov. and Nuchella vesicularis gen. et sp. nov.. European Journal of Phycology. 2020
- Meiofauna metabarcoding in Lima estuary (Portugal) suggests high taxon replacement within a background of network stability. Regional Studies in Marine Science. 2020
- Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding. Estuarine, Coastal and Shelf Science. 2020
- Small-scale spatial variation of meiofaunal communities in Lima estuary (NW Portugal) assessed through metabarcoding. Estuarine, Coastal and Shelf Science. 2020
- Gap-analysis and annotated reference library for supporting macroinvertebrate metabarcoding in Atlantic Iberia. Regional Studies in Marine Science. 2020
- Advances in the use of molecular tools in ecological and biodiversity assessment of aquatic ecosystems. Limnetica. 2020
- How oogenesis analysis combined with DNA barcode can help to elucidate taxonomic ambiguities: a polychaete study-based approach. Biota Neotropica. 2020
- Molecular and morphometric analyses identify new lineages within a large Eumida (Annelida) species complex. Zoologica Scripta. 2019
- Current status of the DNA barcode reference library of non-indigenous marine species occurring in European coastal regions. Frontiers in Marine Science. 2019
- Species gap analysis in DNA barcode reference libraries of marine non-indigenous species in the Azores archipelago. Frontiers in Marine Science. 2019
- DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work. Heredity. 2019
- Macaronesian islands as promoters of diversification in amphipods: The remarkable case of the family Hyalidae (Crustacea, Amphipoda). Zoologica Scripta. 2019
- From the popular tRNAleu-COX2 intergenic region to the mitogenome: insights from diverse honey bee populations of Europe and North Africa. Apidologie. 2019
- Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates. Molecular Ecology. 2019
- Deep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates. Molecular Ecology. 2019
- Patterns of spatial and temporal variation in estuarine meiofaunal communities assessed through DNA metabarcoding: a case study in the Lima estuary (NW Portugal). Frontiers in Marine Science. 2019
- Persistence of phylogeographic footprints helps to understand cryptic diversity detected in two marine amphipods widespread in the Mediterranean basin. Molecular Phylogenetics and Evolution. 2019
- Natural history and molecular evolution of demersal Mediterranean sharks and skates inferred by comparative phylogeographic and demographic analyses. African Journal of Biotechnology. 2018
- Contrasting morphological and DNA barcode-suggested species boundaries among shallow-water amphipod fauna from the southern European Atlantic coast. Genome. 2017
- DNA metabarcoding for high-throughput monitoring of estuarine macrobenthic communities. Acta Cytologica. 2017
- Priming of a DNA metabarcoding approach for species identification and inventory in marine macrobenthic communities. Genome. 2017
- Taxonomy, distribution and ecology of the order Phyllodocida (Annelida, Polychaeta) in deep-sea habitats around the Iberian margin. Deep-Sea Research Part II: Topical Studies in Oceanography. 2017
- Assembling and auditing a comprehensive DNA barcode reference library for European marine fishes. Journal of Fish Biology. 2016
- Distribution and species identification in the crustacean isopod genus Dynamene Leach, 1814 along the North East Atlantic-Black Sea axis. Zookeys. 2016
- Starting a DNA barcode reference library for shallow water polychaetes from the southern European Atlantic coast. Molecular Ecology Resources. 2016
- With a little help from DNA barcoding: Investigating the diversity of Gastropoda from the Portuguese coast. Acta Cytologica. 2016
- Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf. EJT. 2014
- DNA Barcoding for Species Assignment: The Case of Mediterranean Marine Fishes 2014
- Enhanced primers for amplification of DNA barcodes from a broad range of marine metazoans. BMC Ecology. 2013
- First record of Zenion hololepis (Zenionidae) in Portuguese continental waters: the northernmost occurrence in the eastern Atlantic. Marine Biodiversity Records. 2012
- Multigene molecular systematics confirm species status of morphologically convergent Pagurus hermit crabs 2011
- Systematic and evolutionary insights derived from mtDNA COI Barcode diversity in the Decapoda (crustacea: Malacostraca) 2011
- The Barcode of Life Initiative: Reply to Dupré, Hollingsworth and Holm. Genomics, Society and Policy. 2007
- The Barcode of Life Initiative: synopsis and prospective societal impacts of DNA barcoding of Fish. Genomics, Society and Policy. 2007
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artigo de conferência
- A DNA barcode reference library for the superorder Peracarida (Crustacea) from the Southern European Atlantic coast 2016
- Deeply divergent DNA barcode lineages within Dynamene edwardsi (Isopoda) from the Northeast Atlantic suggest between four to eight cryptic species 2016
- Phylogeographic structure of Dynamene edwardsi (Crustacea: Isopoda) matches remarkably the sequential genesis of the Macaronesian islands. Genome. 2015
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capítulo de livro
- Why We Need Sustainable Networks Bridging Countries, Disciplines, Cultures and Generations for Aquatic Biomonitoring 2.0: A Perspective Derived From the DNAqua-Net COST Action. Advances in Ecological Research. 2018
- Ancient DNA in archaeological garum remains from the south of Portugal 2015
- The Contribution of the Barcode of Life Initiative to the Discovery and Monitoring of Biodiversity 2012
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documento
- Catch me if you can: current status and topical issues on the use of eDNA-based targeted detection of rare and endangered animal species 2023
- Data science for Industry 4.0 and sustainability: a survey and analysis based on open data 2023
- Reappraisal of the hyperdiverse Platynereis dumerilii (Annelida: Nereididae) species complex in the Northern Atlantic, with the description of two new species. Invertebrate Systematics. 2022
- Submarine cables as precursors of persistent systems for large scale oceans monitoring and autonomous underwater vehicles operation. Oceans Conference Record (IEEE). 2022
- The spatial network structure of intertidal meiofaunal communities derived from environmental DNA metabarcoding surveys in Northwest Iberia 2021
- The small polychaete Platynereis dumerilii revealed as a large species complex with fourteen MOTUs in European marine habitats 2021
- Comparing species detection success between molecular markers in DNA metabarcoding of coastal macroinvertebrates 2021
- How cryptic is cryptic? Combining histology with DNA barcoding to elucidate taxonomic ambiguities in polychaete species 2019
- Distribution patterns of amphipod assemblages along the Iberian Atlantic rocky shores 2019
- Species gap analysis in DNA barcode reference libraries of macrobenthic fauna from transition and coastal waters along the western European Atlantic coast 2017
- Species gap analysis in DNA barcode reference libraries of macrobenthic fauna from transition and coastal waters along the western European Atlantic coast 2017
- Compiling a DNA barcode reference library for benthic molluscs of the Southern European Atlantic coast 2016
- Ancient DNA in archaeological garum remains from the south of Portugal 2015
- Stepwise implementation of high-throughput sequencing metabarcoding to estuarine macrobenthic communities. Genome. 2015
- A ranking system for reference libraries of DNA barcodes: application to marine fish species from Portugal 2012
- Building a reference DNA barcode library for marine amphipods of Portugal 2011
- From DNA barcodes to monitoring of amphipod communities: status and relevance of curation and annotation of DNA sequence data 2011
- A DNA barcode reference library for marine fish of Portugal : design and annotation 2011
- A DNA barcode library for marine fish of Portugal : first hundred species 2010
- Revising the biodiversity of macrobenthos from the Portuguese coast using DNA barcodes 2010
- Multi-level assessment of chronic toxicity of estuarine sediments with the amphipod Gammarus locusta: I. Biochemical endpoints. Marine Environmental Research. 2005
- Multi-level assessment of chronic toxicity of estuarine sediments with the amphipod Gammarus locusta: II. Individual and population endpoints. Marine Environmental Research. 2005
- Comparing DNA metabarcoding with morphology in the assessment of macrozoobenthos in Portuguese transitional waters in the scope of the Water Framework Directive monitoring
- DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
- DNA metabarcoding-based detection of non-indigenous invertebrates in recreational marinas: influence of sample type and seasonal variation
- Detection of diadromous fish using environmental DNA: prospects for its use in conservation of endangered species occurring in Portugal
- Multi-marker DNA metabarcoding for precise species identification in ichthyoplankton samples: a proof-of-concept study
- Status and prospects of marine NIS detection and monitoring through (e)DNA metabarcoding