publicações selecionadas
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artigo académico
- Epilactose as a Promising Butyrate-Promoter Prebiotic via Microbiota Modulation. Life. 2024
- Heterologous expression and structure prediction of a xylanase identified from a compost metagenomic library. Applied Microbiology and Biotechnology. 2024
- Exploring the presence of oral bacteria in non-oral sites of patients with cardiovascular diseases using whole metagenomic data. Acta Cytologica. 2024
- Functional and sequence-based metagenomics to uncover carbohydrate-degrading enzymes from composting samples. Applied Microbiology and Biotechnology. 2023
- Contributions of Adaptive Laboratory Evolution towards the Enhancement of the Biotechnological Potential of Non-Conventional Yeast Species. Journal of Fungi. 2023
- Epilactose as a promising butyrate-promoter prebiotic via microbiota modulation (submitted). Applied Microbiology and Biotechnology. 2023
- Uncovering the promiscuous activity of IL -6 proteins: A multi-dimensional analysis of phylogeny, classification and residue conservation. Protein Science. 2022
- A glimpse at an early stage of microbe domestication revealed in the variable genome of Torulaspora delbrueckii, an emergent industrial yeast. Molecular Ecology. 2022
- Learning from eighty years of studies - a comprehensive catalogue of non-Saccharomyces yeasts associated with viticulture and winemaking. FEMS Yeast Research. 2021
- Clavispora santaluciae f.a., sp. nov., a novel ascomycetous yeast species isolated from grapes. International Journal of Systematic and Evolutionary Microbiology. 2020
- Starmerella vitis f.a., sp. nov., a yeast species isolated from flowers and grapes. Antonie van Leeuwenhoek. 2020
- Advances in Chemical and Biological Methods to Identify Microorganisms: From Past to Present. Antibiotics. 2019
- Differentiation of Saccharomyces cerevisiae populations from vineyards of the Azores Archipelago: Geography vs Ecology. Antibiotics. 2018
- Adaptation of S. cerevisiae to Fermented Food Environments Reveals Remarkable Genome Plasticity and the Footprints of Domestication. Molecular Biology and Evolution. 2018
- The influence of Dekkera bruxellensis on the transcriptome of Saccharomyces cerevisiae and on the aromatic profile of synthetic wine must. FEMS Yeast Research. 2017
- Population expansion in the North African Late Pleistocene signalled by mitochondrial DNA haplogroup U6. BMC Evolutionary Biology. 2010
- Anti-androgenic effects of sewage treatment plant effluents in the prosobranch gastropod Nucella lapillus. Comparative Biochemistry and Physiology C-Toxicology & Pharmacology. 2008
- No Evidence for an mtDNA Role in Sperm Motility: Data from Complete Sequencing of Asthenozoospermic Males. Molecular Biology and Evolution. 2007
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artigo de conferência
- Valorization of urban biowaste for the production of volatile fatty acids to be used in fermentation processes 2019
- Screening of non-Saccharomyces wild yeasts for biotechnological applications 2019
- Exploring organic acid producer microorganisms – Identification, morpho- and physiological characterization of wild yeast strains 2018
- New insights into the adaptation of yeasts to anthropic environment using comparative genomics 2015
- Intra-strain phenotypic and genomic variability of the commercial Saccharomyces cerevisiae strains Zymaflore VL1 recovered from vineyard environments 2012
- Microevolutionary changes of commercial Saccharomyces cerevisiae strains recovered from vineyard environments identified by comparative genome hybridization on array. 2012
- Comparative genomics of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments 2011
- Genetic characterization of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments using comparative genome hybridization on array (aCGH) 2011
- Genotypic and pheno-metabolomic characterization of a Saccharomyces cerevisiae strain collection 2011
- Microevolutionary changes of commercial Saccharomyces cerevisiae strains recovered from vineyard environments identified by comparative genome hybridization on array 2011
- Bioinformatic approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collection 2007
- The islamization of Iberian Peninsula: a demographic shift or a cultural change? Search for an answer using extant and ancient DNA from Mértola (Southeast Portugal). 2005
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artigo de revista
- Optimization of a Quantitative PCR Methodology for Detection of Aspergillus spp. and Rhizopus arrhizus. Molecular Diagnosis & Therapy. 2022
- Phylogeography of Sub-Saharan Mitochondrial Lineages Outside Africa Highlights the Roles of the Holocene Climate Changes and the Atlantic Slave Trade. International Journal of Molecular Sciences. 2022
- ITS rDNA Barcodes Clarify Molecular Diversity of Aquatic Hyphomycetes. Antibiotics. 2022
- Torulaspora delbrueckii Phenotypic and Metabolic Profiling towards Its Biotechnological Exploitation. Journal of Fungi. 2022
- Metabolic profile of Candida albicans and Candida parapsilosis interactions within dual-species biofilms. FEMS Microbiology Ecology. 2022
- Whole-Genome Sequencing and Annotation of the Yeast Clavispora santaluciae Reveals Important Insights about Its Adaptation to the Vineyard Environment. Journal of Fungi. 2022
- Aquatic Hyphomycete Taxonomic Relatedness Translates into Lower Genetic Divergence of the Nitrate Reductase Gene. Journal of Fungi. 2021
- Fungal Infections Diagnosis – Past, Present and Future. Research in Microbiology. 2021
- Biotechnological Importance of Torulaspora delbrueckii: From the Obscurity to the Spotlight. Journal of Fungi. 2021
- Improvement of Torulaspora delbrueckii Genome Annotation: Towards the Exploitation of Genomic Features of a Biotechnologically Relevant Yeast. Journal of Fungi. 2021
- Single Cell Oil Production by Oleaginous Yeasts Grown in Synthetic and Waste-Derived Volatile Fatty Acids. Antibiotics. 2020
- Oral Candida albicans colonization in healthy individuals: prevalence, genotypic diversity, stability along time and transmissibility. Journal of Oral Microbiology. 2020
- Population Analysis and Evolution of Saccharomyces cerevisiae Mitogenomes. Antibiotics. 2020
- Modified high-throughput Nile red fluorescence assay for the rapid screening of oleaginous yeasts using acetic acid as carbon source. BMC Microbiology. 2020
- Genomic and transcriptomic analysis of Saccharomyces cerevisiae isolates with focus in succinic acid production. FEMS Yeast Research. 2017
- Integrating transcriptomics and metabolomics for the analysis of the aroma profiles of Saccharomyces cerevisiae strains from diverse origins. BMC Genomics. 2017
- Association between Grape Yeast Communities and the Vineyard Ecosystems. Antibiotics. 2017
- Yeast Gup1(2) Proteins Are Homologues of the Hedgehog Morphogens Acyltransferases HHAT(L): Facts and Implications. Journal of Developmental Biology. 2016
- New integrative computational approaches unveil the Saccharomyces cerevisiae pheno-metabolomic fermentative profile and allow strain selection for winemaking. Food Chemistry. 2016
- Yeast Biodiversity in Vineyard Environments Is Increased by Human Intervention. Antibiotics. 2016
- Intrastrain genomic and phenotypic variability of the commercialSaccharomyces cerevisiaestrain Zymaflore VL1 reveals microevolutionary adaptation to vineyard environments. FEMS Yeast Research. 2015
- Evaluation of T3B fingerprinting for identification of clinical and environmental Sporothrix species. FEMS Microbiology Letters. 2015
- Computational models reveal genotype-phenotype associations inSaccharomyces cerevisiae. Yeast. 2014
- Computational Models for Prediction of Yeast Strain Potential for Winemaking from Phenotypic Profiles. Antibiotics. 2013
- Genotyping of Saccharomyces cerevisiae strains by interdelta sequence typing using automated microfluidics. Electrophoresis. 2011
- Computational approaches for the genetic and phenotypic characterization of aSaccharomyces cerevisiaewine yeast collection. Yeast. 2009
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capítulo de livro
- Quick detection and confirmation of microbes in food and water 2022
- Yeast Biodiversity in Vineyard Ecosystems: from Biogeography to Oenology 2019
- Production of Dicarboxylic Acid Platform Chemicals Using Yeasts 2016
- Genotypic and pheno-metabolomic characterization of a Saccharomyces cerevisiae strain collection 2011
- The islamization of Iberian Peninsula: a demographic shift or a cultural change? Search for an answer using extant and ancient DNA from Mértola (Southeast Portugal) 2006
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documento
- Improving Sulphite Resistance in Torulaspora delbrueckii for Winenemaking using Evolutionary Engineering 2024
- Unveiling the diversity of Hxt like transporters in 41 Torulaspora delbrueckii strains 2024
- Improving Sulphite Resistance in Torulaspora delbrueckii for Winemaking using Evolutionary Engineering 2024
- Phylogenomics and functional annotation of 530 non-Saccharomyces yeasts from winemaking environments reveals their Fermentome and Flavorome 2024
- The hidden potential of hypersaline environments: extremophiles as source of new biosurfactants 2024
- Harnessing the quest for eco-friendly alternatives to chemical surfactants by exploring extreme salinity environments 2023
- Insights into the genome and transportome of the yeast Cyberlindnera jadinii 2023
- Characterizing Klebsiella pneumoniae Infections: Integrating Genomic and Epidemiological Data 2023
- Genome wide identification of Hxt like transporter genes in 41 Torulaspora delbrueckii strains 2023
- Genome-wide identification of Hxt-like transporte genes in 41 Torulaspora delbrueckii strains 2023
- Mining bioactive molecules from extreme environments using sequence-based metagenomic 2023
- Non-Saccharomyces yeasts as microbial hosts for succinic acid production using biowastes as substrate 2023
- Uncovering new biosurfactants from Iberian hypersaline enviornments through metagenomics 2023
- Uncovering the genomic variability of the yeast Cyberlindnera jadinii 2023
- Adaptive Laboratory Evolution: Enhancing Sulphite Resistance in Torulaspora delbrueckii for winemaking 2023
- Comprehensive Metabolomic and Aromatic Characterization of 15 Torulaspora delbrueckii Strains Throughout Wine Fermentation 2023
- Uncovering new biosurfactants from Iberian hypersaline environments through metagenomics 2023
- Exploring wine yeast natural biodiversity to select strains with enological traits adapted to climate change 2023
- Identification of lignocellulose-degrading enzymes using metagenomic approaches 2023
- Global metabolomic and aromatic profile of 15 Torulaspora delbrueckii strains during wine fermentation 2023
- Exploring Aveiro salterns to discover new and robust biosurfactant-producing microorganisms 2023
- Manipulation of glucose transport for improved growth and fermentation of Torulaspora delbrueckii 2023
- Exploring Aveiro salterns to discover new and robust biosurfactant producers 2023
- Designing a pipeline for a genomic study of Klebsiella pneumoniae infections in Minho, Portugal 2023
- High-throughput phenotyping of 15 Torulaspora delbrueckii strains during wine fermentation 2023
- Global metabolomic and aromatic profile of 15 Torulaspora delbrueckii strains during wine fermentation. Manuscript in Preparation 2023
- Manipulation of Torulaspora delbrueckii glucose transport for improved growth and fermentative performance. Manuscript in Preparation 2023
- Manuscript in Preparation: Adaptive Laboratorial Evolution of a Torulaspora delbrueckii strain towards improved suphites resistance 2023
- Metagenomic approach to identify genes encoding for glycoside hydrolases in composting samples 2023
- Mining bioactive molecules from extreme environments using sequence-based metagenomics 2023
- Characterization of the repertoire of hexose transportes in Torulaspora delbrueckii 2022
- Improvement of Torulaspora delbrueckii´s sulphite resistance in wine through adaptive laboratorial evolution 2022
- A multi-dimensional analysis of phylogeny, classification, and residue conservation of LIFR-binding IL-6 proteins. 2022
- Bioinformatic pipeline for Klebsiella pneumoniae comparative genomics 2022
- Characterization of the repertoire of hexose transporters in Torulaspora delbrueckii 2022
- O impacto das alterações climáticas na diversidade microbiana 2022
- Designing a pipeline for a genomic study of Klebsiella pneumoniae infections in Minho, Portugal 2022
- Manipulation of glucose transport for improved growth and fermentation of Torulaspora delbrueckii 2022
- Torulaspora delbrueckii phenotypic and metabolic profiling for wine and bread industries and its undelaying molecular bases 2022
- A História da Genética Humana: Convergência e Inclusão 2022
- Deposit of 195 new DNA sequences on NCBI 2022
- Improvement of Torulaspora delbrueckii's sulphite resistance in wine through adaptive laboratory evolution 2022
- Biotechnological exploitation of Torulaspora delbrueckii through phenotypic and metabolic characterization 2021
- Torulaspora delbrueckii phenotypic and metabolic profile towards biotechnological exploitation. 2021
- Torulaspora delbrueckii phenotypic and metabolic profile towards biotechnological exploitation 2021
- Exploring the predicted transportome of the yeast Cyberlidnera jadinii 2021
- O gene da nitrato redutase é diverso entre as espécies de hifomicetos aquáticos? 2020
- Is the nitrate reductase gene divere between the aquatic hyphomycetes species? 2020
- NEW YEAST SPECIES DESCRIBED: Clavispora santaluciae 2020
- NEW YEAST SPECIES DESCRIBED: Starmerella vitis 2020
- PRESS RELEASE about the research paper published in "International Journal of Systematic and Evolutionary Microbiology". 2020
- Production of Fatty Acids by Oleaginous Yeasts: Overview of Fermentative Production and Lipidic Profile 2019
- Screening of non-Saccharomyces wild yeasts for biotechnological applications 2019
- Torulaspora delbrueckii genomic data: bioinformatic analysis towards elucidation of its fermentation capacity and application in wine industry 2019
- Use of natural yeast isolates to produce succinic acid: biotechnological exploitation of Torulaspora delbrueckii 2019
- Valorization of urban biowaste for the production of volatile fatty acids to be used in fermentation processes 2019
- Oleaginous yeast selection for the production of lipidic compounds: development of a fermentation protocol regarding nutrient requirements and growth conditions 2019
- Promotional video produced for research dissemination with the support of the U.Norte Inova Project (NORTE 2020) 2018
- Horizontal Gene Transfer and Introgression: key mechanisms of adaptation of yeast to its ecological niches 2018
- High-throughput screening of oleaginous yeasts by using innovative fluorimetric and spectroscopic approaches 2018
- Volatile fatty acids as carbon source for single cell oil production by oleaginous yeasts 2018
- Volatile fatty acids as carbon source for single cell oil production by oleaginous yeasts. 2018
- Exploring organic acid producer microorganisms – Identification, morpho- and physiological characterization of wild yeast strains 2018
- High-throughput screening of oleaginous yeasts by using Nile red fluorescence method 2018
- Production of single cell oil by oleaginous yeasts: evaluation of the lipidic profile 2018
- Selection of oleaginous yeasts: development of innovative screening methods using fluorimetric approaches 2018
- Single cell oil production by oleaginous yeasts: overview of fermentative production and lipidic profile 2018
- Innovative Approaches for the Rapid Screening of Lipids Producing Yeasts 2018
- Innovative approach for the rapid screening of lipids producing yeasts 2018
- Promising Saccharomyces cerevisiae yeast strains for an improved fermentative production of succinic acid: genomic and transcriptomic characterization 2018
- Exploring organic acid producer microorganisms: Identification, morpho- and physiological characterization of wild yeast strains 2018
- Oleaginous yeast selection for the production of lipidic compounds 2017
- Screening of Single Cell Oils producing Yeasts Using Volatile Fatty Acids as Carbon Sources 2017
- Phenotypic differentiation and selection of Saccharomyces cerevisiae strains from vineyards of the Azores Archipelago 2016
- Yeast communities associated to vineyards from the Azores Archipelago and their geographic delineation 2016
- Promising Saccharomyces cerevisiae yeast strains for an improved fermentative production of succinic acid 2016
- Deciphering the adaptation of yeast to anthropic environment using comparative genomics 2015
- Gene expression profiles associated with aroma compounds production by wine, sake, cachaça and laboratory Saccharomyces cerevisiae strains 2015
- Fermentative production of succinic acid: promising Saccharomyces cerevisiae strains identified towards an improved production 2015
- Genetic determinants responsible for the adaptation of Saccharomyces cerevisiae strains to different ecological niches 2014
- New insights into the adaptation of yeast to anthropic niches using comparative genomics. Focus on flor yeast. 2014
- Comparison of the yeast community present in agrofood wastes through conventional methods and metagenomic analysis 2014
- Pheno-metabolomics characterization of a Saccharomyces cerevisiae strain collection by integrative data analysis approaches 2013
- Study of genetic and phenotypic relationships in a Saccharomyces cerevisiae strain collection using computational approaches 2013
- Intra-strain phenotypic and genomic variability of the commercial Saccharomyces cerevisiae strains Zymaflore VL1 recovered from vineyard environments 2013
- Study of genetic and phenotypic relationships in a Saccharomyces cerevisiae strain collection using computational approaches 2012
- The phenotypic landscape of a Saccharomyces cerevisiae strain collection 2012
- Intra-strain phenotypic and genomic variability of the commercial Saccharomyces cerevisiae strains Zymaflore VL1 recovered from vineyard environments 2012
- Microevolutionary changes of commercial Saccharomyces cerevisiae strains recovered from vineyard environments identified by comparative genome hybridization on array. 2012
- The genotypic and pheno-metabolomic landscape of a Saccharomyces cerevisiae strain collection 2011
- Characterization of wine fermentations using fiber optic-mediated UV-VIS-SWNIR spectroscopy 2011
- Comparative genomics of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments 2011
- Genetic characterization of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments using comparative genome hybridization on array (aCGH) 2011
- Microevolutionary changes of commercial Saccharomyces cerevisiae strains recovered from vineyard environments identified by comparative genome hybridization on array 2011
- Microfluidics-based automated genotyping of Saccharomyces cerevisiae strains by interdelta sequence typing – an interlaboratory comparison 2010
- The genetic and phenotypic characterization of a Saccharomyces cerevisiae wine strains collection by computational approaches 2010
- Computational approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collection 2009
- OpenMicrobio – A framework for computational simulation of cellular communities during bioprocess engineering 2009
- Bioinformatic approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collection 2008
- Population analysis of Saccharomyces cerevisiae strains from different appellations of origin and grape varieties by microsatellite analysis 2008
- Microsatellite analysis reveals populational structures of Saccharomyces cerevisiae strains from different appellations of origin and grape varieties 2008
- The phenotypic heterogeneity of Saccharomyces cerevisiae strains from natural environments 2008
- Bioinformatic approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collection 2007
- CAG repeat instability and motor deficit in a transgenic mouse model of Machado-Joseph disease 2006
- The Islamization of Iberian Peninsula: a demographic shift or a cultural change? Search for an answer using extant and ancient DNA from Mértola (Southeast Portugal) 2005
- Study of the interference of a mixture of estrogens in the utilization of imposex as a bio indicator of the contamination by Tributyltin (TBT) 2004
- Aquatic Hyphomycete Taxonomic Relatedness Translates into Lower Genetic Divergence of the Nitrate Reductase Gene (GenBank Accession numbers: OK605570-OK605582; OK037615-OK037621; MZ812093-MZ812109))
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poster de conferência
- Identification of lignocellulose-degrading enzymes using metagenomic approaches 2023
- Study of genetic and phenotypic relationships in a Saccharomyces cerevisiae strain collection using computational approaches 2012
- The phenotypic landscape of a Saccharomyces cerevisiae strain collection 2012
- Characterization of wine fermentations using fiber optic-mediated UV-VIS-SWNIR spectroscopy 2011
- Genetic characterization of commercial Saccharomyces cerevisiae isolates recovered from vineyard environments using comparative genome hybridization on array (aCGH) 2011
- Microfluidics-based automated genotyping of Saccharomyces Cerevisiae strain by interdelta sequence typing : an interlaboratory comparasion 2010
- Microsatellite analysis reveals populational structures of saccharomyces cerevisiae strains from different appellations of origin and grape varieties 2008
- The genetic and phenotypic characterization of a saccharomyces cerevisiae wine yeast collection using bioinformatic approaches 2008
- Bioinformatic approaches for the genetic and phenotypic characterization of a Saccharomyces cerevisiae wine yeast collection 2008
- The phenotypic heterogeneity of saccharomyces cerevisiae strains from natural environments 2008
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teses